OMICtools can help a) experimental researchers/clinicians find appropriate tools for their needs b) developers to stay up to date and to avoid redundancy c) funding agencies to ensure that the submitted projects are high value-added. Do you want help us to improve OMICtools? Details here.

Publication: OMICtools: an informative directory for multi-omic data analysis
Vincent J. Henry; Anita E. Bandrowski; Anne-Sophie Pepin; Bruno J. Gonzalez; Arnaud Desfeux
Database 2014; doi: 10.1093/database/bau069

NGS-QC Generator
  (5/5)
The major characteristics of this approach is its universality; i.e. its capacity of assessing QC descriptors for any kind of ChIP-seq and enrichment-related datasets. In fact all other currently available methods require either the use of peak callers for sites annotations (which require different conditions when treating broad or sharp profiles) or they are mainly designed for sharp enrichment patterns. Importantly, the NGS-QC Generator tool has been used for assessing QC indicators for more than 7000 publicly available datasets and is expected to cover all available datasets in a close future. Such QC indicators are available through the dedicated website www.ngs-qc.org
Posted by marco A. Mendoza on Jul 31, 2014
Addgene
  (5/5)
I am the Executive Director of Addgene. Note that Addgene is more than a database--Addgene is a repository. We receive, curate, and distribute plasmids made in labs around the world. The we distributed these 40,000 unique items to 78 countries (>100,000 distributions a year). Our website has plasmid data and rich molecular biology resources.
Posted by Joanne Kamens on Jul 30, 2014
HiTC
  (5/5)
Very nice package. Well maintained and up-to-date !
Posted by C.Jin on Jul 17, 2014
CMGRN
  (5/5)
a good bioinformatics tools for network
Posted by yufei on Jun 24, 2014
ZENBU
  (5/5)
An useful browser which allow to visualise and analyse sequencing dataset "on the fly".
Posted by Touati on Jun 04, 2014
ZENBU
  (5/5)
highly recommended genome browser to compare in-house NGS data to ENCODE and FANTOM resources
Posted by nicolas on Jun 04, 2014
SNPdryad
  (5/5)
The website is very user-friendly. I highly recommend it.
Posted by David Moses on May 24, 2014
GeneCodis
it fails often
Posted by ana carrera on Jul 20, 2014
Epitopia
why result output always in error
Posted by AISYAH PRATIWI on Jul 18, 2014
URPD
I contacted the corresponding authors. Without answer nor server amelioration, we moved URPD as deprecated tool.
Posted by Vincent Henry on Jul 11, 2014
Sfold
Sfold and related web servers like soligo and others could not loaded in Windows Xp os but it open only in windows 7. Kindly resolve the issue that we can access the server in Windows XP.
Posted by Rahul Banik on Jul 04, 2014
MetaboAnalyst
Hi
I have been used this site for analyzing my metabolomics data but unfortunately I can not enter the site any more because of error 502. Can anybody help please?
Posted by Samira Khodayari on Jul 02, 2014
FusionMap
it's unable to detect split fusion.
Posted by Haoxuan Jin on Jun 25, 2014