Search engine for biological data analysis

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Epigenomic analysis software tools and databases

Epigenomics

Epigenomic analysis software tools and databases

Metabolomic analysis software tools and databases

Metabolomics

Metabolomic analysis software tools and databases

Fluxomic analysis software tools and databases

Fluxomics

Fluxomic analysis software tools and databases

Biological pathway analysis software tools and databases

Pathway analysis

Biological pathway analysis software tools and databases

Browse by Omic Topics

Bioinformatics Tools

Most Recent Tools

Mechanism of Action… Mechanism of Action of the Human Microbiome

MAHMI Mechanism of Action of the Human Microbiome

Provides comprehensive information about the sequence of potential…

Provides comprehensive information about the sequence of potential immunomodulatory and antiproliferative peptides encrypted in the proteins produced by the human gut microbiota. MAHMI database…

FARME DB FARME DB

FARME DB

Focuses on functional metagenomic Antibiotic Resistance (AR) gene elements and…

Focuses on functional metagenomic Antibiotic Resistance (AR) gene elements and provides a resource to better understand AR. FARME DB is a database of DNA and protein sequences derived exclusively…

KTCNlncDB KTCNlncDB

KTCNlncDB

Collects long non-coding RNA (IncRNA) data obtained from the analysis of…

Collects long non-coding RNA (IncRNA) data obtained from the analysis of RNA-Seq data from 50 samples. KTCNlncDB is a platform devoted to Keratoconus (KTCN) transcriptome. It is a unique resource…

RNA-protein… RNA-protein Association and Interaction Networks

RAIN RNA-protein Association and Interaction Networks

A database of ncRNA–RNA and ncRNA–protein interactions and its integration…

A database of ncRNA–RNA and ncRNA–protein interactions and its integration with the STRING database of protein–protein interactions (PPI). RAIN uses an integrative scoring scheme to assign a…

Most Popular Tools

Web app
VENNY VENNY

VENNY

An interactive tool for comparing lists with Venn Diagrams.

An interactive tool for comparing lists with Venn Diagrams.

Desktop app
G T A T C G C T A SAMtools SAMtools

SAMtools

A suite of programs for interacting with high-throughput sequencing data. It…

A suite of programs for interacting with high-throughput sequencing data. It can manipulate alignments in the SAM/BAM/CRAM formats : reading, writing, editing, indexing, viewing and converting…

footprintDB footprintDB

footprintDB

Predicts transcription factors which bind a specific DNA site or motif and DNA…

Predicts transcription factors which bind a specific DNA site or motif and DNA motifs or sites likely to be recognized by a specific DNA-binding protein.

Desktop app
G T A T C G C T A Bowtie Bowtie

Bowtie

An ultrafast, memory-efficient short read aligner. It aligns short DNA…

An ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a…

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User reviews

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methyLiftover by Kevin C. Johnson

Easy to use and detailed documentation. Maintainer responded promptly to inquiries.

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ProteinLounge by GMartha

Excellent site for biological researchers. All their databases and tools were very helpful in my research, specially…

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ProteinLounge by blaxmi

I would like to thank the Protein Lounge team for creating great online tools and databases. I am using the tools for…

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