Dataset features

Specifications


Application: miRNA array analysis
Number of samples: 120
Release date: Mar 23 2015
Last update date: May 2 2017
Access: Public
Diseases: Disease, Carcinoma, Hepatocellular, Neoplasms, Brachydactyly
Dataset link Identification of differentially expressed microRNAs between human HCC tumors with and without vascular invasion [batch 2]

Experimental Protocol


MiRNA microarray analysis was performed on miRNA extracted from formalin-fixed paraffin-embedded (FFPE) HCC tumor specimens. The first batch of 57 HCC tumors was analyzed and the differentially expressed miRNAs were obtained between 34 VI- and 23 VI+ tumors. To avoid a potential batch effect, the second batch of 115 HCC tumor foci included 57 VI- and 58 VI+ tumors were then independently analyzed. Our study was performed with approval of the University of Rochester Research Subjects Review Board (RSRB00029467).

Repositories


GEO

GSE67139

BioProject

PRJNA279100

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