Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 6
Release date: Jul 20 2009
Last update date: Mar 21 2012
Access: Public
Dataset link Phaseolotoxin synthesis is regulated by the GacS/GacA two-component system

Experimental Protocol


Transcriptional profiles of a P. syringae pv. phaseolicola NPS3121 null gacA mutant were compared to those of the wild-type strain. Cultures were grown in minimal medium at 18°C (which is the temperature at which phaseolotoxin is produced and the bacteria achieves full virulence) and harvested during the late log phase of the exponential growth. RNA from three biological replicates and each with two technical replicates were hybridize to control variation that might affect data interpretation.

Repositories


GEO

GSE16632

ArrayExpress

E-GEOD-16632

BioProject

PRJNA117347

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Contact


Jose Luis Hernandez-Flores