Dataset features

Specifications


Application: DNA methylation array analysis, ChIP-on-chip analysis
Number of samples: 17
Release date: Aug 7 2008
Last update date: Mar 20 2012
Access: Public
Diseases: Neoplasms, Occupational Diseases, Prostatic Neoplasms
Dataset link Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line

Experimental Protocol


Profiling 5mC and H3K27m3/Suz12 occupancy in the PC3 cancer line and the PrEC system. Hybridization over a custom array including a representative set of promoters (-2.5 to +1 kb) with variable CpG content levels and variable expression levels in the two cell systems.

Repositories


GEO

GSE12334

ArrayExpress

E-GEOD-12334

BioProject

PRJNA113227

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Contact


Amos Tanay