Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 28
Release date: Jun 13 2017
Last update date: Nov 30 2018
Access: Public
Diseases: Neoplasms
Dataset link Erk-dependent Epigenetic Reprogramming Underlies Epithelial to Mesenchymal Transition

Experimental Protocol


1) After treatment of NMuMG cells with TGF-beta, three timepoints viz. 0hr, 4hr, 24hr were captured. To inhibit Erk pathway, Erk inhibitor is administered to NMuMG cells 30 min prior to TGF-beta treatment and captured at 4hr and 24hr timepoints. 2) For each timepoint captured, RNAseq and H3K27ac ChIPseq was performed.

Repositories


GEO

GSE92333

ENA

SRP095025

BioProject

PRJNA357255

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