Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 8
Release date: Feb 1 2013
Last update date: Mar 31 2016
Access: Public
Computational protocol: Bowtie, edgeR, TAIR
Dataset link Genome-wide identification of PIF3-binding sites and direct-target genes of PIF3 transcriptional regulation in skotomorphogenesis [ChIP-Seq]

Experimental Protocol


Four biological replicates data of PIF3-binding sites were collected by comparing the parallel ChIP samples from transgenic seedlings overexpressing Myc-epitope-tagged PIF3 (35S:PIF3-5xMyc, P3M) in pif3-3 null mutant background and the wild-type (WT) control.

Repositories


GEO

GSE39215

ArrayExpress

E-GEOD-39215

ENA

SRP014179

BioProject

PRJNA170238

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Contact


Yu Zhang

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