Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 36
Release date: Jul 22 2010
Last update date: Mar 20 2012
Access: Public
Chemicals: Benzoates, Polycyclic Aromatic Hydrocarbons, Pyruvic Acid
Dataset link NaphS2 Gene Expression During Anaerobic Degradation of Naphthalene

Experimental Protocol


For each experimental set, aRNA from NaphS2 was labelled Cy5 (experiment) or Cy3(control) with three biological replicates hybridized in duplicate. In addition, because of the size of the predicted genome of NaphS2, ORFs were divided into two separate array designs, designated set1 and set2, such that set1 and set2 represent two separate array designs (probe sets) to be treated separately in statistical analysis.

Repositories


GEO

GSE12323

ArrayExpress

E-GEOD-12323

BioProject

PRJNA113553

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