|Number of samples:||19|
|Release date:||Nov 28 2018|
|Last update date:||Nov 30 2018|
|Taxon:||Homo sapiens, Mus musculus|
|Dataset link||Analysis of 3D interactions identifies candidate host genes that transposable elements potentially regulate (4C-Seq)|
We adapted 4C-seq protocols to amplify interactions from multiple sites by designing oligos that hybridized to the consensus sequence of specific endogenous retroviruses. This was applied to different cell types (B cells, fibroblasts and mouse embryonic stem cells) obtained from mice of different inbred strains.