Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 14
Release date: Jul 1 2012
Last update date: Aug 1 2018
Access: Public
Diseases: Neurodegenerative Diseases
Dataset link Parallel high-throughput RNA-sequencing suggests little overlap of differential gene expression between knockout of TDP-43 and its over-expression in central nervous system in Drosophila

Experimental Protocol


In this study we compare the effects of knockout of the TDP-43 ortholog (TBPH) in the fly nervous system with the effects of its overexpression. 2 treatment groups are presented. In the first, TDP-43 knockout (G2) is compared to control (A1) and rescue (G2; TDP-43-GAL4>UAS-TDP-43). In the second comparison, the motor neuron driver D42-GAL4 is used to overexpress TDP-43 in motor neurons, using LacZ as a control for overexpression of a foreign protein.

Repositories


GEO

GSE31194

ArrayExpress

E-GEOD-31194

ENA

SRP009268

BioProject

PRJNA144755

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