Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 7
Release date: Dec 2 2014
Last update date: Dec 2 2014
Access: Public
Chemicals: 5-Methylcytosine
Dataset link Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP proteins in Coprinopsis cinerea [CMS-seq]

Experimental Protocol


Anti-CMS data has been generated for two biological replicates where one biological replicate has three technical replicates and the other biological replicate has two technical replicaltes. For each biologial replicate one Input replicate has been generated. based on sodium bisulfite-mediated conversion of 5hmC to cytosine-5-methylenesulfonate (CMS); CMS-containing DNA fragments are then immunoprecipitated using a CMS-specific antiserum.

Repositories


GEO

GSE46963

ENA

SRP022756

BioProject

PRJNA203154

Download


Contact


Lukas Chavez