Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 4
Release date: Nov 2 2012
Last update date: Dec 21 2016
Access: Public
Taxon: Sus scrofa, Homo sapiens, Rattus norvegicus
Dataset link Impact of oral compost-extract administration on gene expression in the rat gastrointestinal tract

Experimental Protocol


In Male Wistar rats aged 3 weeks, tap water was supplemented with 1.0% (v/v) compost extract for the experimental rats, whereas water only was given to the control rats. The rats received water ad libitum for 12 weeks. Fresh gut samples were collected from individual rats at the end of the feeding test and stored at -80°C. The intestine were separated from the gut and used as samples for the isolation of total RNA. otal RNA was then subjected to microarray experiments using the Whole Rat Genome (4x44k) Oligo Microarray (Agilent Technologies, Inc.)

Repositories


GEO

GSE37732

ArrayExpress

E-GEOD-37732

BioProject

PRJNA163097

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Contact


Takumi Nishiuchi