Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 20
Release date: Oct 26 2015
Last update date: Sep 21 2018
Access: Public
Genes: CTCF
Taxon: Drosophila melanogaster
Dataset link Active chromatin and transcription play a key role in chromosome partitioning into topologiсally associating domains

Experimental Protocol


Hi-C experiments, PolyA+ RNA profiling and mapping of chromosomal rearrangements in four Drosophila melanogaster cell lines.

Repositories


GEO

GSE69013

ArrayExpress

E-GEOD-69013

ENA

SRP058460

BioProject

PRJNA284291

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Contact


Ekaterina Khrameeva