Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 35
Release date: Nov 12 2016
Last update date: Nov 26 2018
Access: Public
Diseases: Malaria
Dataset link Macrophage Colony Stimulating Factor derived from CD4+ T cells aids in control of an intracellular infection [RNA-seq]

Experimental Protocol


Antigen-experienced (CD11a+ CD49d+) CD4+ T cells were isolated by double-sorting from the blood of C57BL/6 adult female mice 6 days post-infection with Plasmodium chabaudi. Single cells were isolated and processed for RNA sequencing using a Fluidigm C1 integrated fluidic circuit chip. 35 biological replicates were analyzed.

Repositories


GEO

GSE81197

ENA

SRP074580

BioProject

PRJNA320953

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Contact


Charlie Kim