Dataset features

Specifications


Application: Hi-C analysis
Number of samples: 28
Release date: Sep 13 2016
Last update date: Aug 7 2018
Access: Public
Taxon: Saccharomyces cerevisiae, Schizosaccharomyces pombe
Dataset link Micro-C XL: assaying chromosome conformation at length scales from the nucleosome to the entire genome

Experimental Protocol


Chromatin is fragmented by Mnase, subsequenct nucleosomal end repair, and a modified two-step method for purfiying ligation products. Using Illumina paired-end sequencing maps Micro-C library and generates nucleosome resolution contact maps.

Repositories


GEO

GSE85220

ENA

SRP080954

BioProject

PRJNA336566

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Contact


Oliver Rando