Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Jun 16 2016
Last update date: Nov 26 2018
Access: Public
Dataset link The Zinc Finger Transcription Factor Sp9 Is Required for the Development of Striatopallidal Projection Neurons

Experimental Protocol


total RNA was isolated and sequenced from the striatum of the P0 littermate Sp9Flox/Flox control or conditional mutant striatum of Drd2-Cre; Sp9Flox/Flox mice in triplicate using an Illumina high-seq 2500. Raw data was analyzed using TopHat. Genes were considered changed which demonstrated fold-change>=2, and p value <=0.05. Changed genes were then filtered to reveal Sp9 downstream targets which were altered in vivo due to the loss of Sp9 expression.

Repositories


GEO

GSE83373

ArrayExpress

E-GEOD-83373

ENA

SRP076589

BioProject

PRJNA325728

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Contact


Zhengang Yang