Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 16
Release date: Sep 24 2013
Last update date: Aug 15 2018
Access: Public
Computational protocol: GeneSpring GX, SAM, EasyGO, TreeView
Dataset link Expression data from volatile treated and insect damaged Arabidopsis thaliana

Experimental Protocol


A system using Lima bean plants, from which HIPVs can be effectively induced by leafminer feeding, as emitters and Arabidopsis thaliana as receivers is used to track the priming process between neighbor plants. The Arabisopsis thaliana seedlings were treated by volatiles from leafminer fed lima bean for 24h or 48h for RNA extraction and hybridization on Affymetrix microarrays. The Arabisopsis thaliana seedlings fed by leafminer directly were also collected The for RNA extraction and hybridization on Affymetrix micorarrays. We want to explore the response of Arabidopsis thaliana to priming volatiles during a 24h-48h time course. We also want to compare the effect of priming and direct leafminer feeding.

Repositories


GEO

GSE33505

ArrayExpress

E-GEOD-33505

BioProject

PRJNA148837

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Contact


Sufang Zhang

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