Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 8
Release date: May 20 2014
Last update date: Nov 27 2018
Access: Public
Diseases: Carcinoma, Carcinoma, Squamous Cell
Dataset link H3K27me3 in four squamous cell carcinoma cell lines

Experimental Protocol


ChIP-Seq for H3K27 trimethylation was performed for two HPV-positive and two HPV-negative squamous cell carcinoma (SCC) cell lines. Input DNA was also sequenced for each sample to serve as a control. The goal was to determine overall differences in H3K27me3 patterns observed between the HPV-positive and HPV-negative SCC cell lines.

Repositories


GEO

GSE38629

ArrayExpress

E-GEOD-38629

ENA

SRP013640

BioProject

PRJNA168296

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Contact


Maureen Sartor
Maureen A Sartor