Computational protocol: In silico study of fucoxanthin as a tumor cytotoxic agent

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Protocol publication

[…] Docking calculations were carried out on branded HP PC running windows XP as the operating system, with Intel 3 GHz Core 2 and 1 GB memory hardware. The softwares used for docking preparation were Yasara ver 1.6 and Autodock ver 4.2. Meanwhile, Autodock Vina ver. 1.1 algorithms[] were used for binding calculation. Virtual analysis of docking site was used by Autodock Tools ver 1.4 and ArgusLab ver 4.01. […]

Pipeline specifications

Software tools YASARA, AutoDock, AutoDock Vina
Applications Drug design, Protein interaction analysis
Diseases Neoplasms
Chemicals Colchicine, Hydrogen, Paclitaxel