16S Classifier specifications

Information


Unique identifier OMICS_10244
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Input can be complete 16S rRNA gene or a selected hypervariable region or a combination of multiple hypervariable regions. The input file must be single line nucleotide sequences in fasta format with a '.fasta' extension and the primers should be removed from the sequences before submission.
Operating system Unix/Linux, Windows
Programming languages Perl, R
License Commercial
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Archaebacteria
  • Eubacteria

Versioning


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Maintainer


  • person_outline Vineet K. Sharma <>

Information


Unique identifier OMICS_10244
Interface Web user interface
Restrictions to use None
Input data Input can be complete 16S rRNA gene or a selected hypervariable region or a combination of multiple hypervariable regions. The input file must be single line nucleotide sequences in fasta format with a '.fasta' extension and the primers should be removed from the sequences before submission.
Programming languages Perl, PHP, R
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Archaebacteria
  • Eubacteria

Maintainer


  • person_outline Vineet K. Sharma <>

16S Classifier article

16S Classifier institution(s)
MetaInformatics Laboratory, Metagenomics and Systems Biology Group, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Madhya Pradesh, India
16S Classifier funding source(s)
This work was supported by the intramural funding received from Indian Institute of Science Education and Research Bhopal (IISER Bhopal).

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