Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 20
Release date: May 31 2007
Last update date: Mar 16 2012
Access: Public
Chemicals: Oxygen
Dataset link Reactive oxygen species trigger a regulatory module involved in the early responses of rice seedlings to cold stress

Experimental Protocol


This experiment involves the analysis of changes in gene expression in response to cold stress in a total of five time points (0.5, 2, 6, 12 and 24 hrs). Control (29C) and cold stress (10C) samples were labeled with Cy5 and Cy3, respectively. No dye swap replicate was performed in this experiment. Gene expression analysis was performed with two independent biological replicates (R1 and R2) for each time point. In each biological replicate, there were two technical replicates (T1 and T2). These technical replicates were represented by duplicate set of spots in each microarray slide.

Repositories


GEO

GSE7071

BioProject

PRJNA98477

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Contact


Benildo de los Reyes

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