Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 42
Release date: Apr 9 2018
Last update date: Nov 28 2018
Access: Public
Diseases: Urinary Bladder Neoplasms, Neoplasms
Dataset link Tumor evolution and drug response in patient-derived organoid models of bladder cancer

Experimental Protocol


We generated organoids from bladder tumor tissue. The organoids were trypsinized, plated in matrigel and overlaid with medium. The medium was changed every 3 days. After 14 days of plating, Organoids were harvested and processed for RNA isolation and transcriptome analysis using Ambion MagMAX RNA isolation kit.

Repositories


GEO

GSE103990

ENA

SRP118077

BioProject

PRJNA407895

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Contact


Suk Hyung Lee