Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 4
Release date: Jan 24 2017
Last update date: Nov 29 2018
Access: Public
Diseases: Arthritis, Rheumatoid, Autoimmune Diseases, Celiac Disease, Colitis, Ulcerative, Crohn Disease, Myositis, Psoriasis, Mucositis
Mutations: rs1465321, rs2058622, rs1551398, rs1551399
Computational protocol: Subread, DESeq2
Dataset link Genetic variants alter T-bet binding and gene expression in mucosal inflammatory disease

Experimental Protocol


Correlation of T-bet binding sites and autoimmune disease associate SNPs

Repositories


GEO

GSE81881

ENA

SRP075698

BioProject

PRJNA322847

Download


Contact


Richard Jenner

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Dataset publication