Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 6
Release date: Jan 12 2017
Last update date: Oct 24 2018
Access: Public
Dataset link RNA binds to a CBP regulatory motif to stimulate histone acetylation and transcription

Experimental Protocol


MEFs were treated with 4-thiouridine for 16h, irradiated with 365nm UV and CBP immunopreciptated. RNA species cross-linked to CBP were purified and sequenced. The series contains 2 biological replicates for CBP PAR-CLIP seq, and negative controls for background PAR-CLIP binding: nuclear flag-tagged GFP (nGFP) and the DNA binding domain of yeast protein Gal4p (Gal4-DBD) (two replicates each)

Repositories


GEO

GSE75684

ENA

SRP066981

BioProject

PRJNA305043

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