Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 17
Release date: Sep 13 2017
Last update date: Nov 21 2018
Access: Public
Genes: RXRA, MYOD1, MYOG
Computational protocol: TopHat, Cufflinks
Dataset link ChIP-seq profiling of histone modifications and retinoid X receptor occupancy during early myogenic differentiation

Experimental Protocol


We explored genome-wide enrichment of H4K8ac, H3K9ac, H3K18ac, H3K27ac, H3K27me3 and RXRα signals using high throughput ChIP-seq of C2C12 myoblasts differentiated for 24 hours with or without 50 nM bexarotene (Bex or Ctl). Proliferating myoblasts and input chromatin DNA were used as controls.

Repositories


GEO

GSE94558

ENA

SRP098929

BioProject

PRJNA371490

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Contact


Qiao Li

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