Dataset features

Specifications


Application: BS-seq analysis
Number of samples: 18
Release date: Dec 21 2015
Last update date: Oct 24 2018
Access: Public
Diseases: Leukemia, Myeloid, Acute
Chemicals: Cholesterol, Sodium Cholate
Dataset link Genome wide promoter methylation analysis of mouse macrophages and endothelial cells isolated from ischemic hindlimbs using RRBS sequencing

Experimental Protocol


Macrophages and endothelial whole genome DNA methylation was performed in triplicates (Each sample was pooled from 3-4 mice) by RRBS Sequencing approach using Illumina HiSeq 2500. qRT–PCR validation was performed using TaqMan assays.

Repositories


GEO

GSE65759

ArrayExpress

E-GEOD-65759

ENA

SRP053380

BioProject

PRJNA274974

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Contact


Mohan Babu