Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 6
Release date: Mar 9 2007
Last update date: Mar 16 2012
Access: Public
Diseases: Hyper-IgM Immunodeficiency Syndrome
Chemicals: Vancomycin
Dataset link Identification of molecular markers involved in glycopeptide resistance of S. aureus

Experimental Protocol


Strains either sensitive or resistant to glycopeptides were grown separately. Total RNA extracted from stationary-phase culture were purified, labeled and hybridized in the Cy-3 channel against a pool of genomic DNA of strains used to design the microarray. We performed duplicate measurements for all conditions. The strains are MRGR3: parental strain, 14-4: Glycopeptide Intermediate S. aureus (GISA) and 14-4Rev: a revertant strain obtained from 14-4, susceptible to glycopeptides

Repositories


GEO

GSE5188

BioProject

PRJNA96525

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Contact


FRANCOIS Patrice