Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 9
Release date: Mar 8 2017
Last update date: Nov 29 2018
Access: Public
Diseases: Liver Neoplasms, Neoplasms, Pancreatic Neoplasms
Computational protocol: PrimeView, limma, STAR, Subread, edgeR, iRegulon, GSEA, GEO
Dataset link Acriflavine inhibits the epithelial-to-mesenchymal transition in vitro in liver and pancreatic cancer cells (part of study on PANC1 cells treated with CoCl2)

Experimental Protocol


Three conditions were investigated: (1) untreated PANC1 cells (= controls), (2) PANC1 cells treated with only CoCl2, (3) PANC1 cells treated with CoCl2 and ACF. For each condition three biological replicates were profiled.

Repositories


GEO

GSE82104

ENA

SRP075959

BioProject

PRJNA324011

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Contact


Wouter Van Delm
Rekin's Janky

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