Dataset features

Specifications


Application: Hi-C analysis
Number of samples: 14
Release date: Nov 16 2015
Last update date: Oct 17 2018
Access: Public
Taxon: Homo sapiens
Computational protocol: DESeq2, FourCSeq
Dataset link Multiplexed analysis of chromosome conformation at vastly improved sensitivity

Experimental Protocol


NG Capture-C combines 3C library preparation with oligonucleotide capture for the desired viewpoint restriction fragments, in this case the promoters of genes were exclusively used. The capture step has been optimised to markedly increase the sensitivity of the method (by introducing a double capture step), providing unprecedented levels of sensitivity and reliability for high resolution analysis of the chromatin landscape.

Repositories


GEO

GSE67959

ENA

SRP057265

BioProject

PRJNA281379

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