Dataset features

Specifications


Application: ChIP-on-chip analysis
Number of samples: 21
Release date: Jan 18 2009
Last update date: Jun 5 2012
Access: Public
Diseases: Neoplasms
Dataset link Large organized chromatin K9-modifications (LOCKs) distinguish differentiated from embryonic stem cells

Experimental Protocol


Chromatin was isolated without sonication or formalin cross linking, by digested with micrococcal nuclease, and then chromatin immunoprecipitation was performed with an antibody specific to H3K9Me2. ChIP and input DNA were amplified, labeled by Cy5 and Cy3 respectively, and hybridized to NimbleGen tilling arrays.

Repositories


GEO

GSE13445

ArrayExpress

E-GEOD-13445

BioProject

PRJNA110043

Download


Contact


Andrew Feinberg
Andrew P. Feinberg

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