Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 30
Release date: Dec 6 2012
Last update date: Dec 24 2014
Access: Public
Taxon: Solenopsis invicta
Dataset link Effects of ploidy and sex-locus genotype on gene expression patterns in the fire ant Solenopsis invicta [11d]

Experimental Protocol


Six-condition experiment: haploid male pupae, diploid male pupae, queen pupae, 1-day-old haploid male adults, 1-day-old diploid male adults, 1-day-old queen adults (accession number GSM1031732 - GSM1031734, GSM1031737 - GSM1031738, GSM1031740 - GSM1031742, GSM1031745 - GSM1031746; reprocessed for this study), 11-day-old haploid male adults, 11-day-old diploid male adults, 11-day-old queen adults (accession number GSM1031748 - GSM1031750, GSM1031753 - GSM1031754, GSM1031756 - GSM1031758, GSM1031761 - GSM1031762; reprocessed for this study). Biological replicates: 5 colonies (x 2 genotypes for each colony). Samples were labeled with Cy3 and were compared to the same common reference RNA labeled with Cy5.

Repositories


GEO

GSE42785

ArrayExpress

E-GEOD-42785

BioProject

PRJNA183134

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Contact


Mingkwan Nipitwattanaphon