Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 14
Release date: Sep 14 2013
Last update date: Aug 9 2018
Access: Public
Dataset link Gene expresion changes following knockdown of KDM4C in primary fibroblasts

Experimental Protocol


Primary fibroblasts with stable expression of shRNA targeting KDM4C or a control construct were selected for RNA extraction and hybridization to Affymetrix microarrays. Following selection for stable expression of the shRNA constructs we selected clones expressing 3 non-overlapping constructs targeting KDM4C (shKDM4C) and 2 clones expressing the control construct (shCtr) for analysis by microarray.

Repositories


GEO

GSE41040

ArrayExpress

E-GEOD-41040

BioProject

PRJNA175629

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Contact


Vivian Cheung
Vivian G Cheung