Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 38
Release date: Sep 26 2011
Last update date: May 23 2013
Access: Public
Taxon: Homo sapiens
Dataset link Transcriptome Analysis of Human Supragingival Dental Plaque Microbiome from 19 Twin Pairs with and without Dental Caries

Experimental Protocol


RNA was extracted from RNAprotect (Qiagen, In c.) treated dental plaque scrapings from 38 patients. Amplified cDNA was created and rRNA sequence was removed by subtractive hybridization. Individual patient samples were run on a single lane of an Illumina Genome Analyzer.

Repositories


GEO

GSE31439

ArrayExpress

E-GEOD-31439

ENA

SRP007831

BioProject

PRJNA145807

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Contact


Vasily Sharov
Vasily A Sharov