Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 4
Release date: Mar 1 2018
Last update date: May 31 2018
Access: Public
Chemicals: Cytosine
Dataset link Biogeographic conservation and CO2-dynamics of the cytosine methylome in the globally important cyanobacterium Trichodesmium [RNA-Seq]

Experimental Protocol


Characterize the 5mC cytosine methylation landscape of Trichodesmium erythraeum IMS101 and examine its relationship to its transcriptome under both 380 and 750 µatm CO2, respectively. WGBS of other T. erythraeum isolates (IMSB and 2175) as well as samples from natural populations isolated in situ in order to biogeographically characterize the Trichodesmium cytosine methylome.)

Repositories


GEO

GSE86991

ENA

SRP089988

BioProject

PRJNA343177

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Contact


Eric Webb