Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 12
Release date: Jun 28 2016
Last update date: Oct 18 2018
Access: Public
Dataset link CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells [ChIP-Seq]

Experimental Protocol


CD34+-selected stem and progenitor cells were expanded for three days in the absence of EPO. The cells were further cultured in the presence of EPO, and formaldehyde crosslinked chromatin was isolated after cells differentiated into R3/R4 nucleated erythroid cells. Chromatin Immunoprecipitation followed by sequencing (chIP-seq) was performed using antibodies against CTCF, Cohesin SA1 and H3K27me3, along with a total input control. Two replicates for CTCF and Cohesin SA1 were obtained.

Repositories


GEO

GSE67783

ArrayExpress

E-GEOD-67783

ENA

SRP057176

BioProject

PRJNA281129

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Contact


Vince Schulz

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