Dataset features

Specifications


Application: ChIP-on-chip analysis
Number of samples: 32
Release date: Nov 19 2015
Last update date: Feb 18 2016
Access: Public
Diseases: Neoplasms
Dataset link Essential Roles of the Smc5/6 complex in Replication through Pausing Sites and Endogenous DNA Damage Tolerance

Experimental Protocol


BrdU incorporation profiles by ssDNA-BrdU IP on chip have been generated as described (Katou et al., 2003). Protein binding profiles by ChIP-chip analysis were generated as described (Bermejo et al., 2009). Labeled probes were hybridized to Affymetrix S.cerevisiae Tiling 1.0 (P/N 900645) arrays and processed with TAS software.

Repositories


GEO

GSE72241

ArrayExpress

E-GEOD-72241

BioProject

PRJNA293458

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Contact


Demis Menolfi

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