Dataset features
Specifications
Application: | RNA-seq analysis |
---|---|
Number of samples: | 8 |
Release date: | Jun 5 2016 |
Last update date: | Oct 2 2016 |
Access: | Public |
Diseases: | Citrullinemia |
Chemicals: | Squalene |
Computational protocol: | TAIR, cutadapt, TopHat, Cufflinks, HTSeq, DESeq2, TransDecoder, DAVID |
Dataset link | Metabolic Engineering of Squalene Biosynthesis via Different Genomes Impacts Non-target Cellular Metabolomic and Transcriptomic Pathways |
Experimental Protocol
RNA-seq in Nicotiana tabacum lines engineered via the chloroplast, nuclear or both genomes to express genes encoding farnesyl diphosphate synthase (FPS) and squalene synthase (SQS) to promote squalene synthesis
Repositories
Download
Contact
Henry Daniell
Dataset Statistics
info
Citations per year
Dataset publication
2016
Plant Biotechnol J
PMCID: 4980996
PMID: 27507797
DOI: 10.1111/pbi.12548
call_split See protocol