Similar protocols

Protocol publication

[…] To identify the cca-1(n6122) mutation, sequence variants were identified using the Genome Analysis ToolKit () according to best practices described in (; ). Variant filtering to identify sequence variants in n6122 mutants was performed using snpEff and snpSift (). […]

Pipeline specifications

Software tools GATK, SnpEff, SnpSift
Application WGS analysis
Organisms Caenorhabditis elegans
Chemicals Calcium, Serotonin