Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 9
Release date: Dec 29 2014
Last update date: Oct 10 2018
Access: Public
Genes: TP53COR1, H3F3AP6, TP53, SETDB1, HNRNPK
Dataset link LincRNA-p21 Blocks Somatic Cell Reprogramming by Sustaining H3K9me3 and CpG Methylation at Pluripotent Gene Promoters

Experimental Protocol


RNA-seq expression data during MEF to iPSC reprogramming using three shRNAs, targetting either luciferase (control), lincRNA-p21 and hnRNP-K. Days 6, 9 and 12 of the reprogramming timecourse were analyzed

Repositories


GEO

GSE57967

ENA

SRP042278

BioProject

PRJNA248614

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Contact


Andrew Hutchins