Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 96
Release date: Feb 13 2016
Last update date: Oct 29 2018
Access: Public
Diseases: Neoplasms, Prostatic Neoplasms, Colorectal Neoplasms, Brachydactyly
Dataset link Expression Signatures Identify Origin of Primary and Therapeutic Strategies for Patients with Advanced Solid Tumors

Experimental Protocol


Ninety-six laser capture microdissected adenocarcinoma patient tumor samples of various primary and metastatic sites were processed for Total RNA. Our 96-sample datatset was enriched by inclusion of previously deposited microarray data in GEO (reprocessed for this study): A total of 1217 samples (1104 samples from GSE2109, 113 samples from GSE12630) were reprocessed from the CEL files using RMA. Supplementary files: The reprocessed data matrices. A list of the 1217 Samples' GSM accession numbers and the corresponding reprocessed sample IDs.

Repositories


GEO

GSE18549

ArrayExpress

E-GEOD-18549

BioProject

PRJNA121359

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Contact


David Hsu