Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 404
Release date: Jul 1 2007
Last update date: Oct 29 2018
Access: Public
Diseases: Asthma
Dataset link Genetic variants regulating ORMDL3 expression are determinants of susceptibility to childhood asthma

Experimental Protocol


Gene expression levels were evaluated in 404 children. We then evaluated the relationship between SNPs in the 17q21 region (which show association to asthma in the same children) with gene expression levels. Definition of abbreviations used in Sample records: ped: an anonymized family id, helps identify related individuals id: an anonymized unique id within each family fatid: an anonymized id for the father of each individual, helps identify siblings motid: an anonymized id for the mother of each individual, helps identify siblings Sex: 1=male, 2=female Country: UK = United Kingdom, D = Germany DDAST: Doctor diagnosed asthma; 0 - unknown, 1 - unaffected, 2 - affected Note: id, fatid and motid may be recycled across families. A zero indicates the parents are not available and the individual has no siblings in the dataset

Repositories


GEO

GSE8052

ArrayExpress

E-GEOD-8052

BioProject

PRJNA100881

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Contact


Goncalo Abecasis