2dSpAn statistics

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2dSpAn specifications


Unique identifier OMICS_11438
Name 2dSpAn
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
License Apache License version 2.0
Computer skills Medium
Version 1.0
Stability Stable
Maintained Yes


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  • person_outline Subhadip Basu <>

Publication for 2dSpAn

2dSpAn in publication

PMCID: 5565271
PMID: 28827828
DOI: 10.1371/journal.pone.0182958

[…] instead of a thin backbone. however, this method does not completely capture the segmentation of a dendrite. instead, in this paper, we choose to build upon the method used by basu et al. [] called 2dspan. this method uses a set of convolution kernels at varying angles to accurately segment a dendrite. this method can compensate for varying dendritic spine widths. however, the software requires […]

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2dSpAn institution(s)
Department of Computer Science and Engineering, Jadavpur University, Kolkata, India; Center of New Technologies, University of Warsaw, Warsaw, Poland; MCKV Institute of Engineering, Howrah, India; Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland
2dSpAn funding source(s)
EMMA-West grant from E.U; FASTTRACK grant (SR/FTP/ETA-04/2012) by DST, Government of India; the Polish National Science Centre (Grant number 2014/15/B/ST6/05082) and COST BM1405 and BM1408 EU actions; the National Science Centre grant number UMO-2012/06/M/NZ3/00163 and UMO-2013.09/N/NZ3/03527

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