Dataset features

Specifications


Application: ChIP-on-chip analysis
Number of samples: 14
Release date: Jun 2 2009
Last update date: Mar 21 2017
Access: Public
Dataset link Genome-wide HIF-1 binding sites in HepG2 cells

Experimental Protocol


HepG2 cells were cultured under normoxic (ambient) or hypoxic (0.5%O2, 4 h) conditions. HIF-1 ChIP was performed with a HIF-1 polyclonal Ab. Triplicate ChIPed DNA and inputs were amplified and hybridized onto the Affymetrix Gene-Chip Human Tiling 2.0R Array Set. The MAT algorithm was used to identify peaks of probe intensity (‘‘hits’’).

Repositories


GEO

GSE16347

BioProject

PRJNA116341

Download


Contact


Xiaobo Xia

Dataset Statistics

info

Citations per year

Dataset publication