Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Nov 22 2017
Last update date: Aug 1 2018
Access: Public
Genes: CTCF, BEAF-32, Cp190, CTCF, vtd
Taxon: Drosophila melanogaster, Homo sapiens
Dataset link Sub-kb resolution Hi-C in D. melanogaster reveals conserved characteristics of TADs between insect and mammalian cells

Experimental Protocol


The genome-wide interactome with sub-kb resolution were generated using in-situ Hi-C method in both asychonous Drosophola cell line S2R+ and the cells that were arrest at G1/S

Repositories


GEO

GSE101317

ENA

SRP111713

BioProject

PRJNA393992

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Contact


Qi Wang