Computational protocol: Unique establishment of procephalic head segments is supported by the identification of cis-regulatory elements driving segment-specific segment polarity gene expression in Drosophila

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Protocol publication

[…] In silico analysis to identify putative transcription factor binding sites within cis-regulatory regions was performed using the MatInspector (Cartharius et al. ;; Predictions were inspected manually, checked in correlation with literature reports, and filtered through phylogenetic conservation using the Drosophila EvoPrinter ( or the UCSC Genome Browser ( […]

Pipeline specifications

Software tools MatInspector, EVOPRINTER
Databases UCSC Genome Browser Online Help
Applications Phylogenetics, Genome data visualization
Organisms Drosophila melanogaster