Dataset features

Specifications


Application: ATAC-seq analysis, ChIP-seq analysis
Number of samples: 7
Release date: Sep 5 2017
Last update date: Nov 26 2018
Access: Public
Genes: GJA1
Taxon: Homo sapiens, Mus musculus
Dataset link An inducible and reversible embryonic stem cell biobank reveals functional genomic pathways and disease targets [ATAC-Seq, ChIP-Seq]

Experimental Protocol


We correlated the genome-wide insertion frequency of different lentiviral-, retroviral- and transposon (Tol2 and Sleeping beauty-SB)-based mutagenesis vectors to DNA accessibility and the distribution pattern of active and repressive histone modifications. https://www.haplobank.at/ecommerce/control/haplobank_resource

Repositories


GEO

GSE84089

ENA

SRP077987

BioProject

PRJNA328011

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Contact


Thomas Burkard