Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 6
Release date: Dec 1 2008
Last update date: Aug 28 2018
Access: Public
Diseases: Breast Neoplasms, Neoplasms
Dataset link Breast cancer-associated fibroblasts confer AKT1-mediated epigenetic silencing of Cystatin M in epithelial cells.

Experimental Protocol


MCF10A cells were cocultured with different breast fibroblasts that extracted from either breasttumors or normal breast tissues. After three weeks coculture, MCF10A cells were sorted and harvested for total RNA extraction. Affymetrix expression microarray was performed to analyze gene expression changes. Neither replicates nor dye-swaps was carried out.

Repositories


GEO

GSE10046

ArrayExpress

E-GEOD-10046

BioProject

PRJNA108619

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Contact


Sandya Liyanarachchi