Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis, BS-seq analysis
Number of samples: 15
Release date: Jul 11 2015
Last update date: Oct 24 2018
Access: Public
Diseases: Deficiency Diseases
Computational protocol: Bismark, MethPipe
Dataset link MIWI2 and MILI have differential effects on piRNA biogenesis and DNA methylation

Experimental Protocol


Small RNA profiles (19-30 nt range) of embryonic (E16.5) and post-natal (P10) testis of Miwi2 mutant mice and matched heterozygote controls. mRNA profiles of embryonic testis (E16.5) of heterozygote control mice and of postnatal testis (P10) of Miwi2 and Mili mutants and heterozygote controls. CpG methylation BS-seq profile of postnatal (P10) spermatocytes of Miwi2 mutant mice and matched heterozygote controls.

Repositories


GEO

GSE70731

ArrayExpress

E-GEOD-70731

ENA

SRP060660

BioProject

PRJNA289502

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Contact


Sergei Manakov
Sergei A Manakov

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