Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 15
Release date: Apr 13 2011
Last update date: Mar 22 2012
Access: Public
Chemicals: Cytosine
Genes: TET1, Tet1
Dataset link Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity (Affymetrix gene expression data)

Experimental Protocol


[GSM611209-GSM611217] Control (shScr) or two different Tet1 knockdown (shTet1#4 or shTet1#5) mouse ES cells were used. Each experiment was performed in triplicates. [GSM675884-GSM675889] Control (shScr) or Sin3A knockdown (shSin3A) mouse ES cells were used.Each experiment was performed in triplicates.

Repositories


GEO

GSE24842

ArrayExpress

E-GEOD-24842

BioProject

PRJNA133433

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Contact


Kristine Williams