Dataset features
Specifications
Application: | Gene expression microarray analysis |
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Number of samples: | 50 |
Release date: | Jun 30 2016 |
Last update date: | Apr 20 2018 |
Access: | Public |
Diseases: | Psoriasis |
Dataset link | Based on Molecular Profiling of Gene Expression, Palmoplantar Pustulosis and Palmoplantar Pustular Psoriasis are Highly Related Diseases that Appear to Be Distinct from Psoriasis Vulgaris |
Experimental Protocol
Skin biopsies from subjects with PPP (3), PPPP (6), psoriasis vulgaris (10) and acral skin from normal subjects (7) were analyzed using gene expression microarray. Principal component analysis showed that PPP and PPPP were different from psoriasis vulgaris and normal acral skin. However gene expression of PPP and PPPP clustered together and could not be used to differentiate PPP from PPPP. Gene-wise comparison between PPP and PPPP found no gene to be differentially expressed with a false discovery rate lower than 0.6. Surprisingly we found a higher expression of several genes involved in neural pathways (e.g. GPRIN and ADAM23) in PPP/PPPP as compared to psoriasis vulgaris and normal acral skin. Immunohistochemistry confirmed those findings and showed a keratinocyte localization for those proteins.
Repositories
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Contact
Mayte Suarez-Farinas
Dataset Statistics
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Citations per year
Dataset publication
2016
PLoS One
PMCID: 4859542
PMID: 27152848
DOI: 10.1371/journal.pone.0155215